counts_example
counts_example.RdGene expression matrix from the Gide et al. (2019) metastatic melanoma cohort. Rows correspond to genes (HUGO gene symbols) and columns to patient samples. This dataset is used to compute features for training machine learning models.
Source
Gide T.N., Quek C., Menzies A.M., Tasker A.T., Shang P., Holst J., Madore J., Lim S.Y., Velickovic R., Wongchenko M., et al. Distinct Immune Cell Populations Define Response to Anti-PD-1 Monotherapy and Anti-PD-1/Anti-CTLA-4 Combined Therapy. Cancer Cell. 2019;35:238–255. doi: 10.1016/j.ccell.2019.01.003.
Examples
data(counts_example)
head(counts_example)
#> Sample_Pt1.baseline Sample_Pt10.baseline Sample_Pt12.baseline
#> COX3 12.14466 14.49254 14.53964
#> ND4L 11.84862 13.85068 13.66200
#> COX1 12.21468 14.23646 14.36030
#> COX2 11.74433 14.56778 14.57406
#> ATP8 13.47687 15.29480 15.75034
#> ND3 11.78558 13.22936 13.90256
#> Sample_Pt13.baseline Sample_Pt14.baseline Sample_Pt15.baseline
#> COX3 13.68661 12.77101 14.85968
#> ND4L 13.84009 12.61257 13.32643
#> COX1 13.92611 12.95721 14.83871
#> COX2 13.41785 12.96555 15.79824
#> ATP8 16.63752 14.12622 16.03469
#> ND3 13.82167 12.67719 14.34679
#> Sample_Pt19.baseline Sample_Pt2.baseline Sample_Pt20.baseline
#> COX3 16.05782 13.87114 14.08489
#> ND4L 14.62114 13.20730 12.19386
#> COX1 14.23826 13.19248 13.80564
#> COX2 15.48158 13.65430 14.30464
#> ATP8 17.81454 14.63645 14.59345
#> ND3 14.79457 14.75452 13.72739
#> Sample_Pt22.baseline Sample_Pt23.baseline Sample_Pt25.baseline
#> COX3 13.33399 14.99559 14.88860
#> ND4L 13.36455 14.94416 13.56379
#> COX1 13.23224 15.43127 14.79563
#> COX2 13.07382 15.25355 15.00808
#> ATP8 16.05049 16.67564 15.40125
#> ND3 13.89794 15.67265 15.37545
#> Sample_Pt27.baseline Sample_Pt28.baseline Sample_Pt29.baseline
#> COX3 14.01846 13.71714 14.07940
#> ND4L 13.35631 12.49605 14.09844
#> COX1 13.75781 13.81198 14.43691
#> COX2 13.51607 13.67077 14.67997
#> ATP8 14.82148 14.81658 15.50479
#> ND3 13.45070 13.35039 13.74252
#> Sample_Pt31.baseline Sample_Pt32.baseline Sample_Pt35.baseline
#> COX3 14.56332 14.41996 13.78566
#> ND4L 13.81898 13.79685 13.99019
#> COX1 13.94718 14.12501 13.99982
#> COX2 14.68803 14.31423 14.51822
#> ATP8 15.37031 15.36844 14.98451
#> ND3 14.39339 14.05325 13.32643
#> Sample_Pt37.baseline Sample_Pt38.baseline Sample_Pt4.baseline
#> COX3 13.98362 13.71167 14.82138
#> ND4L 13.07568 13.21747 14.40354
#> COX1 13.92500 13.09115 14.52191
#> COX2 14.39292 14.10852 14.71789
#> ATP8 14.95379 15.05558 17.06383
#> ND3 13.07960 13.52074 15.56701
#> Sample_Pt5.baseline Sample_Pt6.baseline Sample_Pt7.baseline
#> COX3 8.523758 14.92796 15.40221
#> ND4L 8.194412 14.71489 14.17469
#> COX1 8.696516 14.93203 15.00812
#> COX2 8.056854 14.50971 15.36212
#> ATP8 9.753350 17.48023 15.84247
#> ND3 8.047833 15.08244 13.61609
#> Sample_Pt8.baseline Sample_Pt9.baseline Sample_102T.Tumor.SM.BZ9XL
#> COX3 15.20224 14.77273 3.674687
#> ND4L 14.06827 13.20642 3.054848
#> COX1 14.12048 13.69827 2.533563
#> COX2 15.16011 14.34797 3.263034
#> ATP8 15.89029 14.53260 5.379898
#> ND3 14.47301 15.04431 4.161888
#> Sample_107T.Tumor.SM.BZ9WD Sample_115T.Tumor.SM.BZ9WG
#> COX3 2.887525 3.008989
#> ND4L 1.875780 2.358959
#> COX1 2.117695 2.634593
#> COX2 2.389567 2.636915
#> ATP8 4.008092 5.142005
#> ND3 3.767655 4.025029
#> Sample_122T.Tumor.SM.BZ9WT Sample_126T.Tumor.SM.CDZ2D
#> COX3 2.648465 3.119356
#> ND4L 2.516015 2.513491
#> COX1 2.347666 3.237258
#> COX2 2.937344 3.517276
#> ATP8 4.841470 3.532317
#> ND3 4.062640 2.695994
#> Sample_148T.Tumor.SM.BZ9XH Sample_155T.Tumor.SM.BZ9WV
#> COX3 0.3785116 5.129283
#> ND4L 0.0000000 3.925050
#> COX1 0.2265085 4.283181
#> COX2 0.2265085 4.416840
#> ATP8 0.0000000 6.140983
#> ND3 0.9335726 5.695715
#> Sample_166T.Tumor.SM.AZXO4 Sample_208T.Tumor.SM.AH3NE
#> COX3 2.865919 0.05658353
#> ND4L 2.432959 0.07038933
#> COX1 3.442280 0.04264434
#> COX2 3.601697 0.07038933
#> ATP8 4.576522 0.00000000
#> ND3 3.207893 0.33342373
#> Sample_212T.Tumor.SM.BZ9X2 Sample_255T.Tumor.SM.CO8YG
#> COX3 4.604664 2.643856
#> ND4L 3.632268 1.906891
#> COX1 4.236493 2.669027
#> COX2 4.831877 2.713696
#> ATP8 5.203201 4.234195
#> ND3 4.591560 2.821710
#> Sample_25T.Tumor.SM.BZ9VP Sample_272T.Tumor.SM.BZ9X7
#> COX3 3.901108 3.072106
#> ND4L 2.861955 1.584963
#> COX1 3.363171 2.639232
#> COX2 3.882643 2.737687
#> ATP8 4.920770 4.484783
#> ND3 4.035624 3.160275
#> Sample_278T.Tumor.SM.CRSYW Sample_292T.Tumor.SM.CDZ2C
#> COX3 2.056584 0.8318772
#> ND4L 1.226509 0.0000000
#> COX1 2.592158 0.9411063
#> COX2 1.722466 1.0071955
#> ATP8 2.464668 0.0000000
#> ND3 2.107688 0.9107327
#> Sample_324T.Tumor.SM.BZ9XM Sample_326T.Tumor.SM.BZ9XB
#> COX3 0.4005379 2.720278
#> ND4L 0.1763228 2.682573
#> COX1 0.4541759 2.007196
#> COX2 0.4750849 2.639232
#> ATP8 0.0000000 4.486714
#> ND3 0.4854268 4.275007
#> Sample_333T.Tumor.SM.AZXNZ Sample_346T.Tumor.SM.BZ9XD
#> COX3 3.746313 0.4646683
#> ND4L 2.587365 0.1763228
#> COX1 4.270529 0.3561438
#> COX2 4.000901 0.3334237
#> ATP8 4.687621 1.1570437
#> ND3 2.731183 1.2868811
#> Sample_356T.Tumor.SM.AZXNY Sample_35T.Tumor.SM.BZ9VQ
#> COX3 4.132577 0.3785116
#> ND4L 3.634593 0.2630344
#> COX1 4.637494 0.4222330
#> COX2 5.105594 0.4750849
#> ATP8 5.471187 1.2986583
#> ND3 3.351911 0.5459684
#> Sample_379T.Tumor.SM.BZ9XI Sample_383T.Tumor.SM.BZ9WI
#> COX3 2.954196 3.211012
#> ND4L 1.169925 2.298658
#> COX1 1.655352 2.403268
#> COX2 2.341986 2.622930
#> ATP8 3.350497 3.427606
#> ND3 2.972693 3.432959
#> Sample_391T.Tumor.SM.AZXNX Sample_39T.Tumor.SM.BZ9VS
#> COX3 3.121015 1.1043367
#> ND4L 3.153805 0.7570232
#> COX1 3.695994 0.9183862
#> COX2 4.242603 1.0772430
#> ATP8 3.907852 2.6135317
#> ND3 2.851999 1.8114710
#> Sample_409T.Tumor.SM.BZ9XE Sample_422T.Tumor.SM.BZ9WK
#> COX3 2.718088 1.182692
#> ND4L 1.599318 1.292782
#> COX1 1.608809 1.090853
#> COX2 1.959770 1.275007
#> ATP8 4.035624 1.978196
#> ND3 3.241840 2.316146
#> Sample_42T.Tumor.SM.BZ9VZ Sample_430T.Tumor.SM.AZXO1
#> COX3 2.217231 4.525443
#> ND4L 1.678072 4.554589
#> COX1 1.673556 4.744699
#> COX2 2.223423 5.467279
#> ATP8 3.218781 6.029011
#> ND3 4.089159 4.595146
#> Sample_43T.Tumor.SM.CO8YI Sample_51T.Tumor.SM.9LIOW
#> COX3 1.757023 0.4956952
#> ND4L 1.097611 0.2016339
#> COX1 1.974529 0.9030383
#> COX2 1.807355 0.5260688
#> ATP8 2.516015 1.0214797
#> ND3 2.035624 1.0840643
#> Sample_62T.Tumor.SM.BZ9W5 Sample_77T.Tumor.SM.BZ9W8
#> COX3 1.2016339 3.385431
#> ND4L 0.7136958 2.873813
#> COX1 0.8875253 3.042644
#> COX2 1.0285692 3.772941
#> ATP8 1.7612853 5.419202
#> ND3 1.9448584 3.896272
#> Sample_98T.Tumor.SM.BZ9WA Sample_99T.Tumor.SM.AH3NB
#> COX3 2.819668 0.07038933
#> ND4L 2.548437 0.00000000
#> COX1 2.028569 0.04264434
#> COX2 2.533563 0.08406426
#> ATP8 4.448240 0.37851162
#> ND3 3.883621 0.13750352
#> Sample_9T.Tumor.SM.BZ9XK Sample_Bl1AT.Tumor.SM.BZ9XO
#> COX3 0.53605290 6.656639
#> ND4L 0.05658353 6.930146
#> COX1 0.26303441 6.321567
#> COX2 0.31034012 7.046251
#> ATP8 1.00000000 8.695750
#> ND3 0.87184365 7.629138
#> Sample_PD004T.Tumor.SM.BZ9XG Sample_PDL002T.Tumor.SM.BZ9WQ
#> COX3 1.2868811 1.9818527
#> ND4L 0.9781956 0.9634741
#> COX1 0.7570232 1.3103401
#> COX2 0.9107327 2.0531113
#> ATP8 0.7824086 2.7333543
#> ND3 2.0461418 2.5385382
#> Sample_QQQT.Tumor.SM.AZXO5 Sample_Pt1_Pre_AD101148
#> COX3 2.813525 13.39580
#> ND4L 2.622930 14.10353
#> COX1 3.758090 14.45738
#> COX2 3.300124 14.07456
#> ATP8 4.764474 14.79807
#> ND3 2.666757 13.77643
#> Sample_Pt10_Pre_E9047565 Sample_Pt101_Pre_AD486328
#> COX3 14.53485 12.98718
#> ND4L 13.41548 12.53768
#> COX1 14.41818 13.48721
#> COX2 14.38849 13.00092
#> ATP8 14.59485 13.16014
#> ND3 13.20799 12.74031
#> Sample_Pt103_Pre_AE134058 Sample_Pt106_Pre_AD502250
#> COX3 14.55693 14.81693
#> ND4L 11.96550 14.10681
#> COX1 13.16555 14.61632
#> COX2 14.36953 15.05871
#> ATP8 13.43931 14.25244
#> ND3 14.19368 12.58993
#> Sample_Pt11_Pre_AD153352 Sample_Pt17_Pre_E9047563 Sample_Pt18_Pre_E9024732
#> COX3 14.40899 13.59584 13.75186
#> ND4L 13.74662 12.84133 13.37028
#> COX1 14.67115 13.65352 14.64335
#> COX2 14.50333 12.86444 14.43117
#> ATP8 14.72930 13.65105 13.77180
#> ND3 13.74735 12.07474 12.61887
#> Sample_Pt2_Pre_AD101150 Sample_Pt23_Pre_AD313075 Sample_Pt24_Pre_AD436687
#> COX3 14.75311 14.53716 14.06171
#> ND4L 14.03179 14.32587 13.06122
#> COX1 14.91205 14.60756 14.42390
#> COX2 15.21618 14.56754 13.53284
#> ATP8 15.35803 15.19994 14.10926
#> ND3 14.20205 14.02219 13.42246
#> Sample_Pt26_Pre_AD467789 Sample_Pt27_Pre_AD453873 Sample_Pt28_Pre_AD297619
#> COX3 14.39252 15.06853 13.98175
#> ND4L 13.37613 14.09168 13.67364
#> COX1 14.35680 15.43062 14.27030
#> COX2 14.17454 15.12440 14.27256
#> ATP8 14.03600 14.48979 14.41462
#> ND3 13.34651 14.28142 13.24024
#> Sample_Pt29_Pre_AD497504 Sample_Pt3_Pre_E9024733 Sample_Pt30_Pre_AD497503
#> COX3 13.57353 14.34263 14.02245
#> ND4L 13.51101 13.60941 13.54436
#> COX1 14.14585 14.35542 14.05647
#> COX2 14.49617 14.45218 14.47104
#> ATP8 13.80806 14.71864 14.94490
#> ND3 13.14522 13.32207 13.62434
#> Sample_Pt31_Pre_AD453872 Sample_Pt34_Pre_AD466985 Sample_Pt36_Pre_AD467095
#> COX3 14.53540 14.48111 13.96127
#> ND4L 13.68584 13.34624 13.28901
#> COX1 14.81413 14.53272 14.24034
#> COX2 15.11724 14.59677 13.61597
#> ATP8 14.26605 14.09746 14.21576
#> ND3 12.84233 13.20192 13.28973
#> Sample_Pt37_Pre_AD502452 Sample_Pt38_Pre_E9200719 Sample_Pt39_Pre_AD485899
#> COX3 14.55195 13.92258 14.04465
#> ND4L 13.69153 12.96268 13.79401
#> COX1 14.47237 14.13274 14.40208
#> COX2 14.92750 13.61033 14.32446
#> ATP8 14.40680 13.76984 14.47256
#> ND3 13.98246 12.77588 13.60119
#> Sample_Pt4_Pre_E9021023 Sample_Pt44_Pre_AD467790 Sample_Pt46_Pre_AD467096
#> COX3 14.54134 13.38249 14.11781
#> ND4L 13.83408 12.86490 12.97129
#> COX1 14.71177 13.55279 14.34714
#> COX2 14.64690 13.64002 13.68278
#> ATP8 14.35934 13.67596 13.94718
#> ND3 13.90068 12.56062 13.24753
#> Sample_Pt47_Pre_AD506073 Sample_Pt48_Pre_E9047561 Sample_Pt49_Pre_AD667851
#> COX3 14.41607 14.07020 13.70466
#> ND4L 13.72430 13.78943 13.47104
#> COX1 14.60015 14.39587 14.05782
#> COX2 14.92296 13.98299 13.90961
#> ATP8 14.46843 14.46665 14.00035
#> ND3 13.63481 13.29347 13.52405
#> Sample_Pt5_Pre_E9021022 Sample_Pt52_Pre_AD506075 Sample_Pt59_Pre_AD823915
#> COX3 15.41966 12.79004 14.55645
#> ND4L 14.97513 12.52116 14.15419
#> COX1 15.54714 13.27011 14.98749
#> COX2 15.45837 12.66979 15.11370
#> ATP8 15.57498 13.52564 14.58936
#> ND3 14.58936 12.53236 13.11373
#> Sample_Pt62_Pre_AD608303 Sample_Pt65_Pre_AD793919 Sample_Pt66_Pre_AD667850
#> COX3 14.39259 13.90867 13.40448
#> ND4L 13.79594 13.39406 12.99848
#> COX1 13.78596 13.78749 13.36919
#> COX2 14.55177 13.81758 13.77242
#> ATP8 14.37293 13.87661 13.27317
#> ND3 13.86244 13.24359 13.19403
#> Sample_Pt67_Pre_AD506074 Sample_Pt72_Pre_AD793922 Sample_Pt76_Pre_AD667852
#> COX3 13.98237 15.23092 12.57722
#> ND4L 13.68694 14.66706 11.63676
#> COX1 14.33874 15.29131 12.38470
#> COX2 13.91373 15.66584 12.61317
#> ATP8 14.37354 15.33975 12.60599
#> ND3 13.83516 14.40634 11.87241
#> Sample_Pt77_Pre_AD733591 Sample_Pt78_Pre_AD467018 Sample_Pt79_Pre_AD733587
#> COX3 13.70973 13.01634 13.99780
#> ND4L 13.03411 12.50881 13.00092
#> COX1 13.96786 13.08761 14.38956
#> COX2 13.85681 13.36030 14.07682
#> ATP8 13.95991 13.04209 13.85827
#> ND3 12.88046 12.66347 13.07596
#> Sample_Pt8_Pre_AD153354 Sample_Pt82_Pre_AD823914 Sample_Pt84_Pre_AD486532
#> COX3 13.85302 15.07100 14.73402
#> ND4L 12.96087 14.32481 13.76332
#> COX1 14.11918 15.31950 15.01911
#> COX2 13.89586 14.97715 14.76839
#> ATP8 14.20793 15.46084 14.94709
#> ND3 12.55528 14.20785 13.76010
#> Sample_Pt85_Pre_AD486329 Sample_Pt89_Pre_AE070951 Sample_Pt9_Pre_E9021024
#> COX3 13.96199 14.15236 13.83773
#> ND4L 13.14064 13.33064 13.31388
#> COX1 13.76466 14.04029 14.26935
#> COX2 13.65754 13.47864 14.11740
#> ATP8 13.10632 14.04491 14.07054
#> ND3 12.93690 12.84569 12.65289
#> Sample_Pt90_Pre_AD467873 Sample_Pt92_Pre_AE134060 Sample_Pt94_Pre_AD732850
#> COX3 14.72110 14.70811 14.71167
#> ND4L 13.60745 14.71516 14.06146
#> COX1 14.62468 14.76181 14.93272
#> COX2 14.88784 15.25137 15.04913
#> ATP8 14.89936 15.09437 15.30517
#> ND3 13.27315 14.83081 13.69011
#> Sample_Pt98_Pre_AD733586 Sample_MEL.IPI_Pat02.Tumor.SM.4DJZX
#> COX3 14.21553 2.698218
#> ND4L 13.63719 1.855990
#> COX1 13.84813 3.016140
#> COX2 14.38445 2.508429
#> ATP8 14.96104 3.195348
#> ND3 14.33985 2.817623
#> Sample_MEL.IPI_Pat03.Tumor.SM.4DJZY Sample_MEL.IPI_Pat04.Tumor.SM.4DJZZ
#> COX3 4.254745 0.9107327
#> ND4L 4.300124 0.3334237
#> COX1 4.415488 1.1826923
#> COX2 4.407353 0.7824086
#> ATP8 5.149747 1.4168397
#> ND3 3.835924 0.9183862
#> Sample_MEL.IPI_Pat06.Tumor.SM.4DK12 Sample_MEL.IPI_Pat08.Tumor.SM.4DK14
#> COX3 3.388190 2.272023
#> ND4L 3.550901 1.863938
#> COX1 3.649615 2.257011
#> COX2 3.504620 2.192194
#> ATP8 4.037382 2.500802
#> ND3 3.106013 2.341986
#> Sample_MEL.IPI_Pat118.Tumor.SM.5X2QV Sample_MEL.IPI_Pat119.Tumor.SM.7459N
#> COX3 4.034744 5.177918
#> ND4L 3.783457 5.438293
#> COX1 4.126808 5.560409
#> COX2 4.212569 5.915999
#> ATP8 5.373996 7.217618
#> ND3 4.031219 4.881665
#> Sample_MEL.IPI_Pat123.Tumor.SM.5X2R1 Sample_MEL.IPI_Pat126.Tumor.SM.5X2R4
#> COX3 0.9708537 7.582330
#> ND4L 0.8399596 6.728057
#> COX1 1.1375035 7.007868
#> COX2 0.9634741 8.127582
#> ATP8 1.4489010 8.412231
#> ND3 0.7990873 6.555049
#> Sample_MEL.IPI_Pat14.Tumor.SM.53U3C Sample_MEL.IPI_Pat15.Tumor.SM.4DK1B
#> COX3 2.698218 4.423578
#> ND4L 2.498251 4.920770
#> COX1 3.161888 5.406333
#> COX2 3.228049 5.521051
#> ATP8 4.074677 4.410070
#> ND3 2.659925 4.744161
#> Sample_MEL.IPI_Pat16.Tumor.SM.53U3E Sample_MEL.IPI_Pat19.Tumor.SM.4DK1F
#> COX3 1.786596 2.720278
#> ND4L 2.531069 3.040892
#> COX1 2.408712 3.200065
#> COX2 2.375735 3.193772
#> ATP8 2.207893 2.819668
#> ND3 2.176323 2.851999
#> Sample_MEL.IPI_Pat25.Tumor.SM.4DK1L Sample_MEL.IPI_Pat27.Tumor.SM.4DK1N
#> COX3 3.824768 4.266787
#> ND4L 4.349082 4.021480
#> COX1 4.698218 4.467279
#> COX2 4.891419 4.690417
#> ATP8 3.555816 4.385431
#> ND3 3.340562 3.892391
#> Sample_MEL.IPI_Pat28.Tumor.SM.4DK1O Sample_MEL.IPI_Pat29.Tumor.SM.4DK1P
#> COX3 3.662205 5.193378
#> ND4L 4.025029 4.313971
#> COX1 4.246408 4.653060
#> COX2 4.505891 4.966707
#> ATP8 4.304511 4.842476
#> ND3 3.596935 4.349790
#> Sample_MEL.IPI_Pat33.Tumor.SM.4DK1T Sample_MEL.IPI_Pat36.Tumor.SM.53U3X
#> COX3 3.498251 4.372256
#> ND4L 3.847997 4.240314
#> COX1 4.143230 5.056584
#> COX2 4.454176 4.773996
#> ATP8 3.960697 4.510329
#> ND3 3.393691 2.916477
#> Sample_MEL.IPI_Pat37.Tumor.SM.53U3Y Sample_MEL.IPI_Pat38.Tumor.SM.53U3Z
#> COX3 4.359662 5.088311
#> ND4L 4.120186 4.619413
#> COX1 4.675816 5.488644
#> COX2 4.928844 5.600210
#> ATP8 4.831371 5.000000
#> ND3 3.926948 4.176323
#> Sample_MEL.IPI_Pat39.Tumor.SM.4DK1Z Sample_MEL.IPI_Pat40.Tumor.SM.4DK21
#> COX3 1.922198 4.514122
#> ND4L 1.974529 3.221877
#> COX1 2.124328 4.321928
#> COX2 2.032101 4.066089
#> ATP8 2.448901 4.526695
#> ND3 2.643856 4.141596
#> Sample_MEL.IPI_Pat43.Tumor.SM.4DK24 Sample_MEL.IPI_Pat44.Tumor.SM.4DK25
#> COX3 2.827819 0.4854268
#> ND4L 2.648465 0.5160151
#> COX1 3.419539 0.6507646
#> COX2 3.060047 0.5058909
#> ATP8 3.331992 1.1826923
#> ND3 3.459432 0.1375035
#> Sample_MEL.IPI_Pat45.Tumor.SM.4DK26 Sample_MEL.IPI_Pat46.Tumor.SM.53U48
#> COX3 3.224966 4.063503
#> ND4L 3.160275 3.631104
#> COX1 3.805292 4.297191
#> COX2 3.791814 3.922198
#> ATP8 3.314697 4.566206
#> ND3 2.883621 3.066950
#> Sample_MEL.IPI_Pat47.Tumor.SM.4DK28 Sample_MEL.IPI_Pat49.Tumor.SM.4DK2A
#> COX3 4.352617 2.807355
#> ND4L 4.464015 2.653060
#> COX1 4.920770 3.339137
#> COX2 4.988230 3.327687
#> ATP8 4.675251 3.455492
#> ND3 3.641546 2.797013
#> Sample_MEL.IPI_Pat50.Tumor.SM.53U69 Sample_MEL.IPI_Pat79.Tumor.SM.53U2S
#> COX3 5.767920 4.320485
#> ND4L 5.064366 4.196135
#> COX1 5.455163 4.518535
#> COX2 5.837943 4.665620
#> ATP8 5.420887 4.464015
#> ND3 5.666188 3.799087
#> Sample_MEL.IPI_Pat80.Tumor.SM.4DK36 Sample_MEL.IPI_Pat81.Tumor.SM.4DK37
#> COX3 3.160275 1.709291
#> ND4L 3.588565 1.863938
#> COX1 3.907852 2.150560
#> COX2 4.694323 2.283922
#> ATP8 3.826803 2.472488
#> ND3 3.559492 1.929791
#> Sample_MEL.IPI_Pat83.Tumor.SM.53U2W Sample_MEL.IPI_Pat85.Tumor.SM.53U2Y
#> COX3 4.888500 2.778209
#> ND4L 4.682011 2.097611
#> COX1 5.585864 3.370164
#> COX2 5.178715 3.080658
#> ATP8 5.318678 3.699330
#> ND3 4.586765 2.613532
#> Sample_MEL.IPI_Pat86.Tumor.SM.4DK3C Sample_MEL.IPI_Pat88.Tumor.SM.4DK3E
#> COX3 2.545968 3.931683
#> ND4L 3.288359 3.543496
#> COX1 3.196922 4.563768
#> COX2 3.411426 4.424250
#> ATP8 3.344828 5.131754
#> ND3 2.253989 3.731183
#> Sample_MEL.IPI_Pat90.Tumor.SM.4DK3G Sample_MEL.IPI_Pat98.Tumor.SM.4CU6L
#> COX3 3.320485 5.002252
#> ND4L 3.094236 4.925050
#> COX1 3.212569 5.469886
#> COX2 3.582556 5.762615
#> ATP8 3.751678 5.843230
#> ND3 3.477677 4.430285
#> Sample_10_PD1_PRE Sample_10_ipiPD1_PRE Sample_11_PD1_PRE Sample_12_PD1_PRE
#> COX3 7.147612 4.671859 6.946029 3.491853
#> ND4L 7.084171 3.727920 6.370164 2.771886
#> COX1 7.548591 4.788686 7.104756 4.008989
#> COX2 7.782278 4.412782 7.085233 3.959770
#> ATP8 8.512859 4.844486 7.827883 4.762349
#> ND3 6.391630 4.067811 5.929554 2.622930
#> Sample_12_ipiPD1_PRE Sample_13_PD1_PRE Sample_13_ipiPD1_PRE
#> COX3 3.051372 6.402415 8.355087
#> ND4L 2.201634 5.889717 7.637494
#> COX1 3.447579 5.962318 8.501718
#> COX2 3.095924 6.646307 8.394463
#> ATP8 4.001802 7.077563 9.215436
#> ND3 3.171527 5.348374 6.796494
#> Sample_14_PD1_PRE Sample_14_ipiPD1_PRE Sample_15_PD1_PRE
#> COX3 3.782409 6.114159 3.602884
#> ND4L 2.916477 6.355792 2.422233
#> COX1 3.868884 6.605850 3.916477
#> COX2 3.548437 6.629065 3.901108
#> ATP8 4.680324 6.884232 4.810443
#> ND3 2.776104 6.215290 3.046142
#> Sample_15_ipiPD1_PRE Sample_16_PD1_PRE Sample_17_PD1_PRE
#> COX3 7.144250 4.819668 6.026136
#> ND4L 6.319221 4.047887 5.699885
#> COX1 6.929673 5.434962 6.101818
#> COX2 7.216746 5.608809 6.592308
#> ATP8 7.526617 6.301222 6.444766
#> ND3 5.606146 4.271276 4.695437
#> Sample_17_ipiPD1_PRE Sample_18_PD1_PRE Sample_19_PD1_PRE
#> COX3 2.053111 5.076388 6.442612
#> ND4L 1.510962 5.359310 6.306882
#> COX1 2.435629 5.710669 6.785551
#> COX2 2.580145 5.719731 7.223036
#> ATP8 2.835924 6.244316 7.110509
#> ND3 2.235727 5.129695 5.639522
#> Sample_19_ipiPD1_PRE Sample_1_ipiPD1_PRE Sample_20_ipiPD1_PRE
#> COX3 6.784373 3.584963 2.310340
#> ND4L 6.566663 2.946731 1.536053
#> COX1 7.323640 3.910733 2.662205
#> COX2 8.025970 3.858976 2.244887
#> ATP8 7.689020 4.234961 3.285402
#> ND3 5.984361 3.636915 2.144046
#> Sample_21_PD1_PRE Sample_21_ipiPD1_PRE Sample_23_PD1_PRE
#> COX3 6.783326 4.328406 6.503826
#> ND4L 5.947432 3.922198 6.972922
#> COX1 6.930974 4.649041 7.514832
#> COX2 6.984020 4.504620 7.124948
#> ATP8 7.465403 5.281327 7.985216
#> ND3 5.496015 4.241077 5.632268
#> Sample_23_ipiPD1_PRE Sample_24_ipiPD1_PRE Sample_25_PD1_PRE
#> COX3 7.332260 6.355087 5.560104
#> ND4L 6.194757 5.581050 5.017477
#> COX1 6.856737 6.426768 5.541329
#> COX2 7.905206 6.712321 6.238596
#> ATP8 8.122673 6.453024 5.952567
#> ND3 6.357376 4.760221 4.229588
#> Sample_25_ipiPD1_PRE Sample_26_ipiPD1_PRE Sample_27_PD1_PRE
#> COX3 3.665620 4.343408 3.640390
#> ND4L 2.773996 2.750607 3.155425
#> COX1 3.682573 4.188243 4.146492
#> COX2 3.502076 4.359662 4.184280
#> ATP8 4.572890 5.109778 4.995032
#> ND3 2.912650 3.068671 2.771886
#> Sample_27_ipiPD1_PRE Sample_29_PD1_PRE Sample_2_PD1_PRE
#> COX3 4.753818 5.792855 4.943921
#> ND4L 4.226509 4.616475 4.389567
#> COX1 4.770829 5.987548 5.351558
#> COX2 5.376082 6.316327 4.933573
#> ATP8 5.163901 6.830610 5.725469
#> ND3 3.460743 4.531069 4.537296
#> Sample_2_ipiPD1_PRE Sample_30_PD1_PRE Sample_32_ipiPD1_PRE
#> COX3 2.049631 3.221877 5.560715
#> ND4L 1.035624 2.046142 4.023255
#> COX1 2.253989 3.010780 5.205940
#> COX2 2.427606 3.152183 5.941576
#> ATP8 1.895303 4.379205 6.546277
#> ND3 1.495695 3.297191 4.969933
#> Sample_33_ipiPD1_PRE Sample_34_PD1_PRE Sample_34_ipiPD1_PRE
#> COX3 8.494016 3.311794 2.782409
#> ND4L 7.994410 3.334854 1.875780
#> COX1 8.959017 4.087463 3.235727
#> COX2 9.264231 4.036503 3.085765
#> ATP8 9.745708 4.466627 3.273516
#> ND3 6.998421 2.575312 2.538538
#> Sample_35_PD1_PRE Sample_35_ipiPD1_PRE Sample_36_PD1_PRE
#> COX3 4.405312 3.819668 5.450221
#> ND4L 3.653060 3.023255 4.808900
#> COX1 4.789729 3.666757 5.849749
#> COX2 4.787119 3.762349 6.077670
#> ATP8 5.300856 4.253233 5.731183
#> ND3 3.761285 3.066950 4.555816
#> Sample_36_ipiPD1_PRE Sample_37_ipiPD1_PRE Sample_38_PD1_PRE
#> COX3 6.939579 6.295356 3.601697
#> ND4L 6.154211 6.233044 2.568032
#> COX1 6.956754 7.009997 4.061776
#> COX2 7.315331 7.047560 4.012569
#> ATP8 7.710600 7.379812 4.368070
#> ND3 4.942045 4.966246 3.384050
#> Sample_38_ipiPD1_PRE Sample_3_PD1_PRE Sample_40_PD1_PRE Sample_41_PD1_PRE
#> COX3 5.037382 5.799087 4.013462 7.516882
#> ND4L 4.228819 4.685940 3.649615 6.998534
#> COX1 5.011675 5.354029 4.208673 7.626220
#> COX2 5.210233 5.795715 4.336283 8.119823
#> ATP8 5.533875 6.311067 3.897240 8.536947
#> ND3 4.247928 3.753818 4.135042 6.025472
#> Sample_42_PD1_PRE Sample_44_PD1_PRE Sample_44_ipiPD1_PRE Sample_45_PD1_PRE
#> COX3 4.138323 3.129283 5.566815 4.519164
#> ND4L 3.844988 2.625270 4.723012 3.538538
#> COX1 4.656496 3.681449 5.469886 4.782933
#> COX2 4.840463 3.620586 5.674404 4.893848
#> ATP8 4.632850 3.561937 5.854245 5.510646
#> ND3 3.317594 2.153805 5.102658 4.021480
#> Sample_45_ipiPD1_PRE Sample_46_PD1_PRE Sample_46_ipiPD1_PRE
#> COX3 4.047015 6.681871 3.569248
#> ND4L 2.954196 5.803227 2.613532
#> COX1 3.939227 6.424250 3.631104
#> COX2 4.246408 6.598722 3.478972
#> ATP8 5.118526 6.666473 4.230357
#> ND3 3.851999 4.923625 2.939227
#> Sample_47_PD1_PRE Sample_47_ipiPD1_PRE Sample_48_PD1_PRE Sample_49_PD1_PRE
#> COX3 8.157650 6.561479 4.025029 6.472000
#> ND4L 7.675957 6.305423 3.636915 5.538228
#> COX1 8.518653 6.334854 4.341274 6.186461
#> COX2 8.552823 6.541948 4.600508 6.636625
#> ATP8 9.477839 7.590138 4.000000 6.908693
#> ND3 7.346514 5.663914 3.444932 5.141596
#> Sample_49_ipiPD1_PRE Sample_4_PD1_PRE Sample_50_PD1_PRE
#> COX3 6.303963 5.938991 5.808385
#> ND4L 6.019702 5.222650 5.594549
#> COX1 6.767920 5.962549 6.269594
#> COX2 6.905447 5.877990 6.547820
#> ATP8 6.094236 7.419623 6.777551
#> ND3 5.278357 5.796494 5.497612
#> Sample_50_ipiPD1_PRE Sample_52_PD1_PRE Sample_53_PD1_PRE Sample_54_PD1_PRE
#> COX3 5.737146 5.764739 2.757023 7.094975
#> ND4L 5.832637 5.828327 1.875780 6.939579
#> COX1 6.042644 6.682433 3.353323 7.045050
#> COX2 6.135248 6.517748 2.969012 7.144148
#> ATP8 6.522307 6.741467 2.269033 7.835040
#> ND3 5.249066 4.617063 2.384050 6.599020
#> Sample_5_PD1_PRE Sample_6_PD1_PRE Sample_6_ipiPD1_PRE Sample_7_PD1_PRE
#> COX3 5.400196 6.144862 2.459432 4.780310
#> ND4L 6.498251 5.368768 1.157044 4.602291
#> COX1 6.250204 6.374344 2.627607 5.513491
#> COX2 6.608957 6.862699 2.505891 5.352264
#> ATP8 6.901832 6.614563 2.702658 5.721099
#> ND3 5.649903 5.651052 1.918386 4.196922
#> Sample_7_ipiPD1_PRE Sample_8_PD1_PRE Sample_8_ipiPD1_PRE Sample_9_PD1_PRE
#> COX3 3.641546 2.843984 8.359530 3.860963
#> ND4L 2.298658 1.739848 7.979854 3.633431
#> COX1 3.697107 2.786596 8.076655 4.102658
#> COX2 3.960697 3.003602 8.568944 4.801159
#> ATP8 4.684819 4.010780 8.885788 4.411426
#> ND3 3.924100 2.467279 6.646451 4.259272
#> Sample_Patient100_T_P Sample_Patient102_T_P Sample_Patient105_T_P
#> COX3 2.536053 1.4750849 2.543496
#> ND4L 1.182692 0.7311832 1.752749
#> COX1 3.068671 2.1076879 3.580145
#> COX2 2.604071 1.9068906 3.700440
#> ATP8 3.738768 2.7333543 4.207893
#> ND3 2.454176 1.5849625 3.860963
#> Sample_Patient106_T_P Sample_Patient10_T_M Sample_Patient112_T_P
#> COX3 4.839960 4.089159 1.201634
#> ND4L 4.175525 4.125982 0.000000
#> COX1 4.779785 4.025029 1.372952
#> COX2 5.460415 4.590961 1.773996
#> ATP8 6.141596 5.615593 1.280956
#> ND3 3.887525 4.100137 1.695994
#> Sample_Patient116_T_P Sample_Patient117_T_P Sample_Patient11_T_M
#> COX3 3.065228 3.190615 5.232277
#> ND4L 2.636915 3.025029 5.212958
#> COX1 3.207893 3.771886 5.648753
#> COX2 3.189034 3.566815 6.640390
#> ATP8 4.420887 4.024142 6.963936
#> ND3 3.042644 3.240314 4.605257
#> Sample_Patient121_T_P Sample_Patient125_T_P Sample_Patient126_T_P
#> COX3 2.283922 2.114367 3.503349
#> ND4L 1.028569 2.073820 3.003602
#> COX1 2.584963 2.575312 3.634593
#> COX2 2.424922 2.970854 3.951401
#> ATP8 2.477677 3.589763 4.737146
#> ND3 1.970854 2.435629 2.333424
#> Sample_Patient127_T_P Sample_Patient130_T_P Sample_Patient132_T
#> COX3 1.691534 0.8559897 1.550901
#> ND4L 1.560715 0.0000000 1.269033
#> COX1 1.952334 1.4276062 1.831877
#> COX2 2.389567 0.8318772 2.153805
#> ATP8 1.042644 1.0356239 2.639232
#> ND3 1.761285 0.7824086 1.996389
#> Sample_Patient133_T Sample_Patient134_T Sample_Patient135_T
#> COX3 5.701826 4.351911 2.397803
#> ND4L 4.253233 3.808385 1.895303
#> COX1 5.317955 4.778209 3.166715
#> COX2 6.844988 4.594549 3.134221
#> ATP8 7.588939 5.608514 4.039138
#> ND3 4.916477 4.424922 2.903038
#> Sample_Patient137_T Sample_Patient13_T_M Sample_Patient140_T
#> COX3 2.754888 4.244126 2.724650
#> ND4L 1.778209 3.574102 1.843984
#> COX1 2.847997 4.050502 2.618239
#> COX2 2.825786 3.851999 3.012569
#> ATP8 2.901108 5.726014 4.218006
#> ND3 3.094236 3.249445 2.000000
#> Sample_Patient141_T Sample_Patient143_T Sample_Patient145_T
#> COX3 0.9634741 2.895303 3.198494
#> ND4L 0.5849625 1.835924 2.179511
#> COX1 1.3785116 3.238787 3.981853
#> COX2 1.4956952 3.317594 4.069530
#> ATP8 2.7886857 4.805292 5.503667
#> ND3 1.0143553 3.153805 4.602884
#> Sample_Patient146_T Sample_Patient147_T Sample_Patient148_T
#> COX3 2.378512 4.089159 2.941106
#> ND4L 1.859970 2.889474 1.580145
#> COX1 2.568032 3.561937 2.632268
#> COX2 2.794936 4.825786 2.903038
#> ATP8 3.514753 5.528571 3.948601
#> ND3 2.169925 3.099295 3.080658
#> Sample_Patient149_T Sample_Patient14_T_M Sample_Patient150_T
#> COX3 0.9855004 2.920293 3.494416
#> ND4L 0.7570232 1.769772 2.893362
#> COX1 1.6780719 3.583760 3.619413
#> COX2 1.5753123 3.537296 4.177121
#> ATP8 2.9221978 4.867402 4.835419
#> ND3 1.7484612 3.207893 3.587365
#> Sample_Patient154_T Sample_Patient155_T Sample_Patient156_T
#> COX3 2.446256 0.9927684 3.704872
#> ND4L 1.867896 0.2750070 3.663345
#> COX1 2.372952 1.0908534 4.212569
#> COX2 2.572890 1.0565835 4.465322
#> ATP8 3.514753 1.3045110 5.035184
#> ND3 2.482848 1.9373444 3.683696
#> Sample_Patient158_T Sample_Patient159_T Sample_Patient15_T_M
#> COX3 1.565597 4.190615 1.4276062
#> ND4L 1.220330 3.295723 0.8318772
#> COX1 2.003602 4.207893 1.4698860
#> COX2 2.117695 4.513491 1.1309309
#> ATP8 2.959770 5.273889 1.7180876
#> ND3 1.641546 3.473787 0.9634741
#> Sample_Patient162_T Sample_Patient163_T Sample_Patient165_T
#> COX3 2.350497 2.140779 3.661065
#> ND4L 3.267536 2.014355 3.129283
#> COX1 3.576522 2.424922 3.884598
#> COX2 4.054848 2.565597 3.893362
#> ATP8 4.875289 3.392317 5.363872
#> ND3 3.504620 2.324811 3.526069
#> Sample_Patient166_T Sample_Patient167_T Sample_Patient168_T
#> COX3 1.316146 1.883621 4.555203
#> ND4L 1.378512 1.584963 4.711495
#> COX1 1.226509 2.319040 5.458776
#> COX2 1.659925 2.422233 4.947199
#> ATP8 1.432959 2.944858 6.394034
#> ND3 1.891419 2.275007 4.572890
#> Sample_Patient169_T Sample_Patient170_T Sample_Patient172_T
#> COX3 1.1243281 2.829850 1.422233
#> ND4L 0.7136958 1.773996 0.790772
#> COX1 1.3950628 2.451541 2.100978
#> COX2 1.2750070 2.485427 1.632268
#> ATP8 1.2630344 3.654206 2.495695
#> ND3 1.0143553 3.080658 2.185867
#> Sample_Patient173_T Sample_Patient17_T_M Sample_Patient181_T
#> COX3 5.200065 3.211012 1.5753123
#> ND4L 4.396434 2.427606 0.9259994
#> COX1 5.463688 3.229588 2.1858665
#> COX2 5.760221 3.496974 1.9448584
#> ATP8 6.618826 4.358256 3.0408924
#> ND3 4.934988 2.403268 2.5680321
#> Sample_Patient185_T Sample_Patient187_T Sample_Patient188_T
#> COX3 1.9523336 3.990047 5.108524
#> ND4L 0.9335726 3.252476 4.466627
#> COX1 2.5728897 3.979111 4.799087
#> COX2 2.1890338 4.167519 5.412104
#> ATP8 3.0214797 5.100557 6.548745
#> ND3 3.1473067 3.349082 4.408032
#> Sample_Patient189_T Sample_Patient18_T_M Sample_Patient191_T
#> COX3 0.9107327 5.230741 2.490570
#> ND4L 0.6690268 4.217231 1.906891
#> COX1 1.0426443 4.806324 2.620586
#> COX2 1.0635029 5.662205 3.173127
#> ATP8 1.1763228 6.549823 3.607626
#> ND3 1.0635029 4.312520 2.395063
#> Sample_Patient193_T Sample_Patient195_T Sample_Patient196_T
#> COX3 3.396434 2.063503 4.748998
#> ND4L 3.375735 1.604071 4.512859
#> COX1 3.480265 2.666757 4.806324
#> COX2 4.182692 2.794936 5.205158
#> ATP8 4.448901 3.605257 6.333066
#> ND3 3.485427 2.803227 4.403949
#> Sample_Patient197_T Sample_Patient1_T_M Sample_Patient200_T
#> COX3 3.173127 2.427606 4.072106
#> ND4L 2.021480 1.941106 3.382667
#> COX1 3.310340 2.563158 4.326250
#> COX2 3.545968 2.788686 4.326969
#> ATP8 4.231125 3.953265 4.855990
#> ND3 2.451541 3.327687 3.691534
#> Sample_Patient203_T Sample_Patient204_T Sample_Patient205_T
#> COX3 4.087463 3.122673 2.636915
#> ND4L 3.533563 2.163499 1.937344
#> COX1 3.727920 2.825786 2.675816
#> COX2 4.203201 3.283922 3.100978
#> ATP8 5.499527 3.641546 3.482848
#> ND3 3.279471 2.823749 1.395063
#> Sample_Patient206_T Sample_Patient20_T_M Sample_Patient21_T_M
#> COX3 3.671293 4.297925 5.016140
#> ND4L 3.372952 3.788686 4.288359
#> COX1 3.794936 4.295723 4.649041
#> COX2 4.035624 4.853996 5.524816
#> ATP8 4.826294 5.343763 6.677790
#> ND3 3.752749 2.985500 4.525443
#> Sample_Patient22_T_M Sample_Patient23_T_M Sample_Patient24_T_M
#> COX3 4.500802 4.404631 0.3103401
#> ND4L 3.575312 3.889474 0.4436067
#> COX1 5.050502 4.266787 0.6322682
#> COX2 5.750874 4.744161 0.6959938
#> ATP8 5.742545 5.583459 0.5360529
#> ND3 4.061776 3.942984 0.7398481
#> Sample_Patient25_T_M Sample_Patient27_T_M Sample_Patient30_T_M
#> COX3 6.099506 3.229588 3.016140
#> ND4L 5.318678 2.462052 2.587365
#> COX1 6.620440 4.172327 3.969012
#> COX2 7.027132 3.990047 3.666757
#> ATP8 7.726354 5.657926 4.655924
#> ND3 5.018367 4.041769 3.708187
#> Sample_Patient31_T_M Sample_Patient32_T_M Sample_Patient33_T_M
#> COX3 3.916477 3.785551 4.561937
#> ND4L 3.207893 2.643856 4.643279
#> COX1 3.864929 4.364572 4.834408
#> COX2 4.785551 4.931683 4.529821
#> ATP8 5.502394 5.903761 6.381629
#> ND3 3.130931 4.651339 4.560104
#> Sample_Patient34_T_M Sample_Patient35_T_M Sample_Patient36_T_M
#> COX3 6.000000 3.531069 3.316146
#> ND4L 5.111031 2.807355 2.618239
#> COX1 6.098243 3.990047 3.475085
#> COX2 5.849749 3.826803 3.303050
#> ATP8 7.149442 3.870858 4.624686
#> ND3 5.438958 2.799087 2.963474
#> Sample_Patient37_T_M Sample_Patient38_T_M Sample_Patient40_T_M
#> COX3 3.367371 4.106013 3.314697
#> ND4L 2.704872 3.282440 3.140779
#> COX1 3.427606 4.280956 3.548437
#> COX2 3.575312 4.931683 4.025915
#> ATP8 4.945795 5.422233 4.137504
#> ND3 3.580145 3.947666 3.001802
#> Sample_Patient42_T_M Sample_Patient45_T_M Sample_Patient47_T_M
#> COX3 4.450881 1.1763228 3.403268
#> ND4L 3.792855 0.0000000 3.582556
#> COX1 4.266787 1.2570106 3.904966
#> COX2 5.280956 1.1634987 4.902074
#> ATP8 4.939227 1.5058909 5.157448
#> ND3 3.827819 0.8559897 3.635754
#> Sample_Patient48_T_M Sample_Patient4_T_M Sample_Patient56_T_M
#> COX3 3.860963 4.183487 3.134221
#> ND4L 2.910733 4.688740 2.599318
#> COX1 4.211791 4.657640 3.480265
#> COX2 4.436295 5.134632 3.690417
#> ATP8 5.740118 5.975217 4.485427
#> ND3 3.524816 5.515069 2.908813
#> Sample_Patient62_T_P Sample_Patient63_T_P Sample_Patient67_T_P
#> COX3 3.891419 5.132988 4.548437
#> ND4L 3.168321 5.565597 3.739848
#> COX1 3.260026 5.522307 4.627023
#> COX2 3.680324 6.411596 5.002252
#> ATP8 4.623516 8.259602 6.306335
#> ND3 2.893362 7.423326 6.214319
#> Sample_Patient6_T_M Sample_Patient72_T_P Sample_Patient73_T_P
#> COX3 3.070389 3.503349 2.608809
#> ND4L 2.229588 2.985500 2.594549
#> COX1 2.750607 3.680324 3.264536
#> COX2 3.316146 4.307429 3.720278
#> ATP8 3.845992 4.865424 4.622930
#> ND3 2.765535 3.953265 3.509696
#> Sample_Patient77_T_P Sample_Patient78_T_P Sample_Patient79_T_P
#> COX3 4.152995 2.684819 3.662205
#> ND4L 3.629939 2.560715 3.119356
#> COX1 4.250962 3.206331 3.916477
#> COX2 4.889474 3.396434 3.875780
#> ATP8 5.187055 4.659354 4.390943
#> ND3 3.368768 2.432959 2.989139
#> Sample_Patient7_T_M Sample_Patient82_T_P Sample_Patient83_T_P
#> COX3 3.523562 1.887525 6.067596
#> ND4L 2.885574 1.244887 5.669877
#> COX1 3.596935 2.021480 6.459923
#> COX2 4.016140 1.790772 7.432625
#> ATP8 4.780310 2.584963 8.130571
#> ND3 3.035624 1.899176 5.942984
#> Sample_Patient86_T_P Sample_Patient87_T_P Sample_Patient8_T_M
#> COX3 1.521051 3.356144 5.575010
#> ND4L 1.321928 3.431623 4.752213
#> COX1 1.914565 3.987321 5.337711
#> COX2 2.358959 4.031219 6.242221
#> ATP8 2.893362 4.831877 6.660780
#> ND3 1.664483 3.174726 4.777683
#> Sample_Patient94_T_P Sample_Patient96_T_P Sample_Patient98_T_P
#> COX3 3.488001 1.646163 3.867896
#> ND4L 2.185867 1.316146 2.885574
#> COX1 3.414136 1.632268 4.187451
#> COX2 3.628774 1.956057 5.185470
#> ATP8 4.571677 2.114367 5.482203
#> ND3 2.726831 1.604071 3.553361
#> Sample_Patient99_T_P Sample_Patient9_T_M
#> COX3 1.803227 1.3448285
#> ND4L 1.948601 1.0840643
#> COX1 2.503349 1.3729521
#> COX2 2.545968 1.0143553
#> ATP8 3.158660 1.9486008
#> ND3 2.223423 0.8718436