Compute deconvolution subgroups
Usage
compute_subgroups(deconvolution, thres_corr, file_name)
Arguments
- deconvolution
A matrix with unprocessed cell deconvolution results
- thres_corr
A numeric value with the minimum correlation allowed to group cell deconvolution features
- file_name
Base name for subgroup
Value
A list containing
A matrix with the processed deconvolution features
Cell subgroups obtained by linear correlation
Cell subgroups obtained by proportionality correlation
Discard cell features either because of low variance or high zero number
