Builds a binary presence matrix indicating which original cell types are present in higher-level cell groups.
Usage
compute.composition.matrix(
deconvolution.subgroupped,
cell.groups,
cells_extra = NULL
)
Arguments
- deconvolution.subgroupped
A list containing "Deconvolution subgroups composition" per model.
- cell.groups
A list containing cell group definitions, where the second element holds the groupings.
Optional vector of additional cell identifiers to consider during extraction.
Value
A binary matrix (data.frame) where rows are cell groups and columns are cell types (1 = present, 0 = absent).
